Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.57□□□□□ -0.4
Cdk5rap1Q8BTW8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cdk5rap1Q8BTW8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm5187-201ENSMUST00000117317 991 ntBASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm42693-201ENSMUST00000196779 631 ntBASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cdk5rap1Q8BTW8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms