Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Gm12539-201ENSMUST00000121549 1098 ntBASIC14□□□□□ -0.17
Rd3Q8BRE0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14□□□□□ -0.17
Rd3Q8BRE0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14□□□□□ -0.17
Rd3Q8BRE0 AC022775.2-201ENSMUST00000227885 646 ntBASIC14□□□□□ -0.17
Rd3Q8BRE0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14□□□□□ -0.17
Rd3Q8BRE0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rd3Q8BRE0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rd3Q8BRE0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Rd3Q8BRE0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Gm4857-201ENSMUST00000192718 785 ntBASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Gm6458-201ENSMUST00000211573 635 ntBASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Rd3Q8BRE0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm12363-201ENSMUST00000122250 668 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm13786-201ENSMUST00000122371 333 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm38158-201ENSMUST00000194617 339 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm8227-201ENSMUST00000223306 571 ntBASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rd3Q8BRE0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms