Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm9387-201ENSMUST00000098624 1320 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Mir7076-201ENSMUST00000183519 74 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Snora73b-201ENSMUST00000083419 205 ntBASIC10.9□□□□□ -0.66
Smg1Q8BKX6 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smg1Q8BKX6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Smg1Q8BKX6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Smg1Q8BKX6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm11941-201ENSMUST00000119904 610 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm2445-201ENSMUST00000182798 989 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm15432-201ENSMUST00000121106 195 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm14832-201ENSMUST00000121289 322 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Smg1Q8BKX6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.88□□□□□ -0.67
Smg1Q8BKX6 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.88□□□□□ -0.67
Smg1Q8BKX6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm14005-208ENSMUST00000223654 681 ntBASIC10.88□□□□□ -0.67
Smg1Q8BKX6 Gm25201-201ENSMUST00000083093 170 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms