Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Gm13453-201ENSMUST00000118708 357 ntBASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chmp2bQ8BJF9 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Mir874-201ENSMUST00000104769 76 ntBASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.56□□□□□ -0.24
Chmp2bQ8BJF9 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gm9063-201ENSMUST00000223299 582 ntBASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Chmp2bQ8BJF9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms