Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm6180-201ENSMUST00000065243 498 ntBASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Samm50Q8BGH2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.52■□□□□ 0.07
Samm50Q8BGH2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Samm50Q8BGH2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Samm50Q8BGH2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Gm12490-201ENSMUST00000120255 560 ntBASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Gm7653-201ENSMUST00000214567 508 ntBASIC15.5■□□□□ 0.07
Samm50Q8BGH2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.5■□□□□ 0.07
Samm50Q8BGH2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Samm50Q8BGH2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm12341-201ENSMUST00000119724 503 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm27772-201ENSMUST00000184900 187 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.49■□□□□ 0.07
Samm50Q8BGH2 Gm9908-201ENSMUST00000211534 448 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms