Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.64□□□□□ -0.39
Vrk1Q80X41 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.64□□□□□ -0.39
Vrk1Q80X41 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.64□□□□□ -0.39
Vrk1Q80X41 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vrk1Q80X41 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm16202-201ENSMUST00000117532 544 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm2231-201ENSMUST00000125661 612 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm7584-201ENSMUST00000175829 940 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm27243-201ENSMUST00000183964 521 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm7783-201ENSMUST00000204795 781 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm9368-201ENSMUST00000219348 831 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.63□□□□□ -0.39
Vrk1Q80X41 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vrk1Q80X41 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.62□□□□□ -0.39
Vrk1Q80X41 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm8805-201ENSMUST00000117848 313 ntBASIC12.62□□□□□ -0.39
Vrk1Q80X41 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vrk1Q80X41 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.62□□□□□ -0.39
Vrk1Q80X41 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms