Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ctdp1Q7TSG2 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Mir1897-201ENSMUST00000122581 272 ntBASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm7775-201ENSMUST00000218871 853 ntBASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ctdp1Q7TSG2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Gm15678-201ENSMUST00000117573 960 ntBASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ctdp1Q7TSG2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Nudt18-202ENSMUST00000228554 3619 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm15460-201ENSMUST00000118147 391 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Gm12151-201ENSMUST00000121374 290 ntBASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ctdp1Q7TSG2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms