Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Snrnp40Q6PE01 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm12566-201ENSMUST00000121479 359 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm2546-201ENSMUST00000182630 991 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Snrnp40Q6PE01 Gm37912-201ENSMUST00000191895 3076 ntBASIC11.58□□□□□ -0.55
Snrnp40Q6PE01 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Snrnp40Q6PE01 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Snrnp40Q6PE01 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Snrnp40Q6PE01 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Snrnp40Q6PE01 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm25214-201ENSMUST00000104573 129 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm11930-201ENSMUST00000117788 190 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm14263-201ENSMUST00000117955 746 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm12217-201ENSMUST00000118858 696 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Mir6927-201ENSMUST00000184494 71 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 AA914427-201ENSMUST00000193194 1166 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.58□□□□□ -0.56
Snrnp40Q6PE01 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms