Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd4Q6PDQ2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm18212-201ENSMUST00000211678 889 ntBASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Gm14832-201ENSMUST00000121289 322 ntBASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 AC138604.1-201ENSMUST00000226969 739 ntBASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd4Q6PDQ2 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm43908-201ENSMUST00000205074 1472 ntBASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm9083-201ENSMUST00000120423 819 ntBASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Gm43947-201ENSMUST00000203019 959 ntBASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd4Q6PDQ2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gzmn-202ENSMUST00000225535 989 ntBASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm12314-201ENSMUST00000118104 538 ntBASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm14921-201ENSMUST00000118643 908 ntBASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd4Q6PDQ2 Gm45925-201ENSMUST00000218882 744 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms