Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smchd1Q6P5D8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm14704-201ENSMUST00000120300 874 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm13316-201ENSMUST00000140537 691 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm7584-201ENSMUST00000175829 940 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm7783-201ENSMUST00000204795 781 ntBASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.41□□□□□ -0.1
Smchd1Q6P5D8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm10608-202ENSMUST00000213924 676 ntBASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Smchd1Q6P5D8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.4□□□□□ -0.11
Smchd1Q6P5D8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm12502-201ENSMUST00000120197 444 ntBASIC14.39□□□□□ -0.11
Smchd1Q6P5D8 Gm13342-201ENSMUST00000121055 207 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms