Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.28□□□□□ -0.6
Usf2Q64705 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Gm17837-201ENSMUST00000186435 985 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Gm33320-201ENSMUST00000192232 530 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.28□□□□□ -0.6
Usf2Q64705 Gm46209-201ENSMUST00000217912 553 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.28□□□□□ -0.6
Usf2Q64705 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Usf2Q64705 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Usf2Q64705 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Usf2Q64705 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Usf2Q64705 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Usf2Q64705 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Usf2Q64705 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Usf2Q64705 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usf2Q64705 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Gm12428-201ENSMUST00000119844 727 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Gm27618-201ENSMUST00000183671 60 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Gm37714-201ENSMUST00000194742 342 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Gm6888-201ENSMUST00000221983 706 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Gm9229-201ENSMUST00000222777 126 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Usf2Q64705 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Usf2Q64705 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.27□□□□□ -0.61
Usf2Q64705 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Usf2Q64705 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.27□□□□□ -0.61
Usf2Q64705 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Usf2Q64705 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Usf2Q64705 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.26□□□□□ -0.61
Usf2Q64705 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.26□□□□□ -0.61
Usf2Q64705 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Usf2Q64705 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms