Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Gm1821-202ENSMUST00000227415 750 ntBASIC12.1□□□□□ -0.47
VcanQ62059 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.1□□□□□ -0.47
VcanQ62059 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VcanQ62059 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Gm13022-201ENSMUST00000121181 285 ntBASIC12.09□□□□□ -0.47
VcanQ62059 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.09□□□□□ -0.47
VcanQ62059 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Mc5r-201ENSMUST00000172148 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Gm42518-201ENSMUST00000196277 938 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
VcanQ62059 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.09□□□□□ -0.47
VcanQ62059 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.09□□□□□ -0.47
VcanQ62059 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Gm27627-201ENSMUST00000183644 150 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
VcanQ62059 Gm40879-201ENSMUST00000220759 612 ntBASIC12.09□□□□□ -0.47
VcanQ62059 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
VcanQ62059 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
VcanQ62059 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
VcanQ62059 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
VcanQ62059 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
VcanQ62059 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
VcanQ62059 Gm24845-201ENSMUST00000158034 109 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
VcanQ62059 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
VcanQ62059 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
VcanQ62059 Gm4482-201ENSMUST00000200876 742 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.08□□□□□ -0.48
VcanQ62059 Gm45598-202ENSMUST00000210719 986 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
VcanQ62059 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.08□□□□□ -0.48
VcanQ62059 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VcanQ62059 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
VcanQ62059 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Gm45500-201ENSMUST00000211676 803 ntBASIC12.07□□□□□ -0.48
VcanQ62059 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
VcanQ62059 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
VcanQ62059 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms