Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Mir6998-201ENSMUST00000183343 64 ntBASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm19091-201ENSMUST00000208120 978 ntBASIC12.72□□□□□ -0.37
Col12a1Q60847 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Col12a1Q60847 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.72□□□□□ -0.37
Col12a1Q60847 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col12a1Q60847 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Col12a1Q60847 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Gm5434-202ENSMUST00000222384 1451 ntBASIC12.71□□□□□ -0.37
Col12a1Q60847 Gm5434-201ENSMUST00000071825 1451 ntBASIC12.71□□□□□ -0.37
Col12a1Q60847 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Col12a1Q60847 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.71□□□□□ -0.37
Col12a1Q60847 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.71□□□□□ -0.37
Col12a1Q60847 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Col12a1Q60847 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Col12a1Q60847 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.71□□□□□ -0.38
Col12a1Q60847 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.71□□□□□ -0.38
Col12a1Q60847 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.71□□□□□ -0.38
Col12a1Q60847 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.71□□□□□ -0.38
Col12a1Q60847 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm10731-201ENSMUST00000181171 448 ntBASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm42518-201ENSMUST00000196277 938 ntBASIC12.71□□□□□ -0.38
Col12a1Q60847 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.71□□□□□ -0.38
Col12a1Q60847 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col12a1Q60847 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col12a1Q60847 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.7□□□□□ -0.38
Col12a1Q60847 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col12a1Q60847 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms