Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Nr1h4Q60641 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nr1h4Q60641 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm5312-201ENSMUST00000203728 547 ntBASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm45841-201ENSMUST00000207700 164 ntBASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.63□□□□□ -0.39
Nr1h4Q60641 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nr1h4Q60641 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.62□□□□□ -0.39
Nr1h4Q60641 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm18905-201ENSMUST00000205454 928 ntBASIC12.62□□□□□ -0.39
Nr1h4Q60641 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.62□□□□□ -0.39
Nr1h4Q60641 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.62□□□□□ -0.39
Nr1h4Q60641 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.62□□□□□ -0.39
Nr1h4Q60641 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nr1h4Q60641 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nr1h4Q60641 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms