Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Mir7221-201ENSMUST00000184009 72 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm28760-201ENSMUST00000185995 736 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm6218-201ENSMUST00000219812 628 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.09□□□□□ -0.31
Scn2bQ56A07 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Scn2bQ56A07 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Scn2bQ56A07 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn2bQ56A07 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Scn2bQ56A07 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.08□□□□□ -0.32
Scn2bQ56A07 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.08□□□□□ -0.32
Scn2bQ56A07 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Gm24447-201ENSMUST00000083977 338 ntBASIC13.08□□□□□ -0.32
Scn2bQ56A07 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.08□□□□□ -0.32
Scn2bQ56A07 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.08□□□□□ -0.32
Scn2bQ56A07 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Scn2bQ56A07 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm7488-201ENSMUST00000117148 684 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm7063-201ENSMUST00000186840 981 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 Gm17795-201ENSMUST00000214505 757 ntBASIC13.07□□□□□ -0.32
Scn2bQ56A07 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Scn2bQ56A07 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms