Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.55□□□□□ -0.08
Bbof1Q3V079 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm14928-201ENSMUST00000120198 477 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.54□□□□□ -0.08
Bbof1Q3V079 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm18307-201ENSMUST00000206864 949 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.54□□□□□ -0.08
Bbof1Q3V079 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Bbof1Q3V079 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.53□□□□□ -0.08
Bbof1Q3V079 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.53□□□□□ -0.08
Bbof1Q3V079 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.53□□□□□ -0.08
Bbof1Q3V079 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Gm23984-201ENSMUST00000157139 203 ntBASIC14.53□□□□□ -0.08
Bbof1Q3V079 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Bbof1Q3V079 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Bbof1Q3V079 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.52□□□□□ -0.09
Bbof1Q3V079 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.52□□□□□ -0.09
Bbof1Q3V079 Gm6745-201ENSMUST00000199216 526 ntBASIC14.52□□□□□ -0.09
Bbof1Q3V079 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
Bbof1Q3V079 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Bbof1Q3V079 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Bbof1Q3V079 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Bbof1Q3V079 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms