Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trim40Q3UWA4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim40Q3UWA4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.4□□□□□ -0.43
Trim40Q3UWA4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
Trim40Q3UWA4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim40Q3UWA4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Gm45841-201ENSMUST00000207700 164 ntBASIC12.39□□□□□ -0.43
Trim40Q3UWA4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim40Q3UWA4 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm25287-201ENSMUST00000103846 110 ntBASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm22918-201ENSMUST00000103855 110 ntBASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm13365-201ENSMUST00000121188 973 ntBASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim40Q3UWA4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm5566-201ENSMUST00000116118 459 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm13015-201ENSMUST00000118674 204 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.37□□□□□ -0.43
Trim40Q3UWA4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms