Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Mir1897-201ENSMUST00000122581 272 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Dupd1-202ENSMUST00000224735 548 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Shd-206ENSMUST00000225145 998 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Shisa3Q3UPR0 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Gm16476-201ENSMUST00000221544 139 ntBASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Shisa3Q3UPR0 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Shisa3Q3UPR0 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms