Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Cks1brtQ3UNC9 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 AA414768-201ENSMUST00000121924 1257 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm5479-201ENSMUST00000160578 435 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm4535-201ENSMUST00000182274 558 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm10355-201ENSMUST00000097146 517 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cks1brtQ3UNC9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gm29741-201ENSMUST00000192667 421 ntBASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cks1brtQ3UNC9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms