Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Upf3bQ3ULL6 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm13612-201ENSMUST00000119276 390 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm17794-201ENSMUST00000220252 955 ntBASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Upf3bQ3ULL6 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Mir7221-201ENSMUST00000184009 72 ntBASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Upf3bQ3ULL6 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Upf3bQ3ULL6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms