Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Brf2Q3UAW9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Gm12341-201ENSMUST00000119724 503 ntBASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Gm18307-201ENSMUST00000206864 949 ntBASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Brf2Q3UAW9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.46□□□□□ -0.42
Brf2Q3UAW9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Brf2Q3UAW9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Brf2Q3UAW9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms