Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.84□□□□□ -0.67
Trim63Q38HM4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim63Q38HM4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Trim63Q38HM4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.67
Trim63Q38HM4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.83□□□□□ -0.68
Trim63Q38HM4 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.83□□□□□ -0.68
Trim63Q38HM4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trim63Q38HM4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm45751-201ENSMUST00000210185 1573 ntBASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm44292-201ENSMUST00000205194 2364 ntBASIC10.82□□□□□ -0.68
Trim63Q38HM4 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Mir874-201ENSMUST00000104769 76 ntBASIC10.82□□□□□ -0.68
Trim63Q38HM4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC10.82□□□□□ -0.68
Trim63Q38HM4 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms