Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm25881-201ENSMUST00000157783 103 ntBASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm37299-201ENSMUST00000193951 826 ntBASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.73□□□□□ -0.53
Chd8Q09XV5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Chd8Q09XV5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm14724-201ENSMUST00000118400 537 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm20694-201ENSMUST00000176943 404 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm5805-201ENSMUST00000072779 456 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Chd8Q09XV5 AC187103.3-201ENSMUST00000225725 646 ntBASIC11.72□□□□□ -0.53
Chd8Q09XV5 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Chd8Q09XV5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.71□□□□□ -0.53
Chd8Q09XV5 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Gm27675-201ENSMUST00000184527 94 ntBASIC11.71□□□□□ -0.53
Chd8Q09XV5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.71□□□□□ -0.53
Chd8Q09XV5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Chd8Q09XV5 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms