Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Tff1Q08423 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.01□□□□□ -0.65
Tff1Q08423 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.01□□□□□ -0.65
Tff1Q08423 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.01□□□□□ -0.65
Tff1Q08423 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.01□□□□□ -0.65
Tff1Q08423 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Gm44719-201ENSMUST00000206404 149 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm18041-201ENSMUST00000218210 618 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Gm9229-201ENSMUST00000222777 126 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.01□□□□□ -0.65
Tff1Q08423 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.01□□□□□ -0.65
Tff1Q08423 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.01□□□□□ -0.65
Tff1Q08423 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Tff1Q08423 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11□□□□□ -0.65
Tff1Q08423 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11□□□□□ -0.65
Tff1Q08423 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Tff1Q08423 Gm43273-201ENSMUST00000199649 2594 ntBASIC11□□□□□ -0.65
Tff1Q08423 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Gm13829-201ENSMUST00000119600 138 ntBASIC11□□□□□ -0.65
Tff1Q08423 Gm15393-201ENSMUST00000120499 219 ntBASIC11□□□□□ -0.65
Tff1Q08423 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11□□□□□ -0.65
Tff1Q08423 Mir1938-201ENSMUST00000158746 100 ntBASIC11□□□□□ -0.65
Tff1Q08423 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Gm6283-201ENSMUST00000182369 1000 ntBASIC11□□□□□ -0.65
Tff1Q08423 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 AC156016.3-201ENSMUST00000228623 344 ntBASIC11□□□□□ -0.65
Tff1Q08423 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Gm15823-201ENSMUST00000064305 670 ntBASIC11□□□□□ -0.65
Tff1Q08423 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tff1Q08423 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Gm7002-201ENSMUST00000221386 2165 ntBASIC11□□□□□ -0.65
Tff1Q08423 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11□□□□□ -0.65
Tff1Q08423 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11□□□□□ -0.65
Tff1Q08423 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Gm13730-201ENSMUST00000121036 1462 ntBASIC11□□□□□ -0.65
Tff1Q08423 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Tff1Q08423 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Tff1Q08423 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tff1Q08423 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tff1Q08423 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Tff1Q08423 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tff1Q08423 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tff1Q08423 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Tff1Q08423 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Tff1Q08423 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms