Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Mir6977-201ENSMUST00000184960 64 ntBASIC13.31□□□□□ -0.28
Pfdn6Q03958 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pfdn6Q03958 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12403-201ENSMUST00000121384 959 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm38223-201ENSMUST00000194484 695 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm42612-201ENSMUST00000197986 623 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm43170-201ENSMUST00000199827 612 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.3□□□□□ -0.28
Pfdn6Q03958 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pfdn6Q03958 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.29□□□□□ -0.28
Pfdn6Q03958 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pfdn6Q03958 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms