Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Scn1bP97952 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Scn1bP97952 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm15678-201ENSMUST00000117573 960 ntBASIC12.07□□□□□ -0.48
Scn1bP97952 Gm14494-201ENSMUST00000118786 435 ntBASIC12.07□□□□□ -0.48
Scn1bP97952 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.07□□□□□ -0.48
Scn1bP97952 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.07□□□□□ -0.48
Scn1bP97952 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.07□□□□□ -0.48
Scn1bP97952 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Scn1bP97952 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.07□□□□□ -0.48
Scn1bP97952 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Scn1bP97952 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.07□□□□□ -0.48
Scn1bP97952 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Scn1bP97952 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.06□□□□□ -0.48
Scn1bP97952 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.06□□□□□ -0.48
Scn1bP97952 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Gm11779-201ENSMUST00000118541 368 ntBASIC12.06□□□□□ -0.48
Scn1bP97952 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn1bP97952 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.06□□□□□ -0.48
Scn1bP97952 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn1bP97952 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn1bP97952 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.06□□□□□ -0.48
Scn1bP97952 Gm6443-201ENSMUST00000203599 874 ntBASIC12.06□□□□□ -0.48
Scn1bP97952 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.06□□□□□ -0.48
Scn1bP97952 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Scn1bP97952 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Scn1bP97952 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms