Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.33□□□□□ -0.6
Smn1P97801 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.33□□□□□ -0.6
Smn1P97801 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.33□□□□□ -0.6
Smn1P97801 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.33□□□□□ -0.6
Smn1P97801 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smn1P97801 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Smn1P97801 Gm7774-201ENSMUST00000200064 533 ntBASIC11.33□□□□□ -0.6
Smn1P97801 Gm45841-201ENSMUST00000207700 164 ntBASIC11.33□□□□□ -0.6
Smn1P97801 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.33□□□□□ -0.6
Smn1P97801 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.33□□□□□ -0.6
Smn1P97801 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Smn1P97801 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Smn1P97801 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smn1P97801 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.32□□□□□ -0.6
Smn1P97801 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Smn1P97801 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm27622-201ENSMUST00000183779 60 ntBASIC11.32□□□□□ -0.6
Smn1P97801 Gm27533-201ENSMUST00000183800 152 ntBASIC11.32□□□□□ -0.6
Smn1P97801 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 AW822252-206ENSMUST00000208904 237 ntBASIC11.32□□□□□ -0.6
Smn1P97801 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Smn1P97801 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Smn1P97801 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.32□□□□□ -0.6
Smn1P97801 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Smn1P97801 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.31□□□□□ -0.6
Smn1P97801 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smn1P97801 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.31□□□□□ -0.6
Smn1P97801 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Smn1P97801 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Smn1P97801 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.31□□□□□ -0.6
Smn1P97801 Mir7221-201ENSMUST00000184009 72 ntBASIC11.31□□□□□ -0.6
Smn1P97801 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.31□□□□□ -0.6
Smn1P97801 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.31□□□□□ -0.6
Smn1P97801 AC225888.1-201ENSMUST00000227184 728 ntBASIC11.31□□□□□ -0.6
Smn1P97801 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Smn1P97801 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Smn1P97801 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms