Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.53□□□□□ -0.4
Nkx3-2P97503 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx3-2P97503 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.52□□□□□ -0.4
Nkx3-2P97503 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx3-2P97503 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm14660-201ENSMUST00000119809 575 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm24644-201ENSMUST00000157114 139 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm8598-201ENSMUST00000221184 836 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.52□□□□□ -0.41
Nkx3-2P97503 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx3-2P97503 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.51□□□□□ -0.41
Nkx3-2P97503 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx3-2P97503 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx3-2P97503 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.5□□□□□ -0.41
Nkx3-2P97503 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms