Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Smarcc1P97496 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Smarcc1P97496 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Smarcc1P97496 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Smarcc1P97496 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.48■□□□□ 0.23
Smarcc1P97496 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Smarcc1P97496 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.48■□□□□ 0.23
Smarcc1P97496 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.48■□□□□ 0.23
Smarcc1P97496 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Smarcc1P97496 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Smarcc1P97496 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Smarcc1P97496 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.48■□□□□ 0.23
Smarcc1P97496 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm14208-201ENSMUST00000119645 678 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm13665-201ENSMUST00000120830 528 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm22121-201ENSMUST00000175148 54 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm27046-201ENSMUST00000182160 463 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm43947-201ENSMUST00000203019 959 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.47■□□□□ 0.23
Smarcc1P97496 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.47■□□□□ 0.23
Smarcc1P97496 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Smarcc1P97496 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.46■□□□□ 0.23
Smarcc1P97496 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.46■□□□□ 0.23
Smarcc1P97496 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Gm22334-201ENSMUST00000158070 133 ntBASIC16.46■□□□□ 0.23
Smarcc1P97496 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc1P97496 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.46■□□□□ 0.23
Smarcc1P97496 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.46■□□□□ 0.23
Smarcc1P97496 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Smarcc1P97496 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Smarcc1P97496 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.46■□□□□ 0.22
Smarcc1P97496 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.45■□□□□ 0.22
Smarcc1P97496 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Smarcc1P97496 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms