Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.5■□□□□ 0.23
Nkx2-3P97334 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Gm7789-202ENSMUST00000211273 1400 ntBASIC16.5■□□□□ 0.23
Nkx2-3P97334 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.5■□□□□ 0.23
Nkx2-3P97334 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nkx2-3P97334 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm14208-201ENSMUST00000119645 678 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm12176-201ENSMUST00000121420 875 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm26956-201ENSMUST00000182176 986 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm5597-201ENSMUST00000182353 1193 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm2260-201ENSMUST00000184965 657 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm8099-201ENSMUST00000200510 742 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Nkx2-3P97334 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Nkx2-3P97334 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.49■□□□□ 0.23
Nkx2-3P97334 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.48■□□□□ 0.23
Nkx2-3P97334 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.48■□□□□ 0.23
Nkx2-3P97334 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Gm16296-201ENSMUST00000159905 325 ntBASIC16.48■□□□□ 0.23
Nkx2-3P97334 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 AC166095.1-201ENSMUST00000223731 1241 ntBASIC16.48■□□□□ 0.23
Nkx2-3P97334 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.48■□□□□ 0.23
Nkx2-3P97334 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Nkx2-3P97334 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Nkx2-3P97334 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms