Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.8□□□□□ -0.52
SgcbP82349 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SgcbP82349 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.8□□□□□ -0.52
SgcbP82349 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.8□□□□□ -0.52
SgcbP82349 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.8□□□□□ -0.52
SgcbP82349 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Gm27847-201ENSMUST00000183711 107 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Gm27375-201ENSMUST00000183799 107 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SgcbP82349 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
SgcbP82349 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SgcbP82349 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.8□□□□□ -0.52
SgcbP82349 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
SgcbP82349 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
SgcbP82349 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
SgcbP82349 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SgcbP82349 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Gm5687-201ENSMUST00000118252 640 ntBASIC11.79□□□□□ -0.52
SgcbP82349 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.79□□□□□ -0.52
SgcbP82349 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.79□□□□□ -0.52
SgcbP82349 Gm8652-201ENSMUST00000181363 964 ntBASIC11.79□□□□□ -0.52
SgcbP82349 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC11.79□□□□□ -0.52
SgcbP82349 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SgcbP82349 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SgcbP82349 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SgcbP82349 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SgcbP82349 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SgcbP82349 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SgcbP82349 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms