Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CiitaP79621 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CiitaP79621 Gm12363-201ENSMUST00000122250 668 ntBASIC14.3□□□□□ -0.12
CiitaP79621 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.3□□□□□ -0.12
CiitaP79621 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.3□□□□□ -0.12
CiitaP79621 Gm4768-201ENSMUST00000206199 686 ntBASIC14.3□□□□□ -0.12
CiitaP79621 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.3□□□□□ -0.12
CiitaP79621 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.3□□□□□ -0.12
CiitaP79621 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
CiitaP79621 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CiitaP79621 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.3□□□□□ -0.12
CiitaP79621 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.3□□□□□ -0.12
CiitaP79621 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CiitaP79621 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC14.3□□□□□ -0.12
CiitaP79621 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.29□□□□□ -0.12
CiitaP79621 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CiitaP79621 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Gm38002-201ENSMUST00000193255 180 ntBASIC14.29□□□□□ -0.12
CiitaP79621 Gm37042-201ENSMUST00000193816 581 ntBASIC14.29□□□□□ -0.12
CiitaP79621 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.29□□□□□ -0.12
CiitaP79621 Gm19163-201ENSMUST00000223313 780 ntBASIC14.29□□□□□ -0.12
CiitaP79621 CU024892.2-201ENSMUST00000224608 832 ntBASIC14.29□□□□□ -0.12
CiitaP79621 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CiitaP79621 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.29□□□□□ -0.12
CiitaP79621 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.29□□□□□ -0.12
CiitaP79621 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CiitaP79621 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CiitaP79621 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CiitaP79621 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.29□□□□□ -0.12
CiitaP79621 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CiitaP79621 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.28□□□□□ -0.12
CiitaP79621 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CiitaP79621 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CiitaP79621 Gm11591-201ENSMUST00000120063 702 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.28□□□□□ -0.12
CiitaP79621 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Gm6222-202ENSMUST00000182143 629 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Gm37008-201ENSMUST00000195712 319 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC14.28□□□□□ -0.12
CiitaP79621 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.28□□□□□ -0.12
CiitaP79621 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.28□□□□□ -0.12
CiitaP79621 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CiitaP79621 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CiitaP79621 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms