Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Nphp4P59240 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC17.71■□□□□ 0.43
Nphp4P59240 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nphp4P59240 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.71■□□□□ 0.43
Nphp4P59240 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC17.71■□□□□ 0.43
Nphp4P59240 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.71■□□□□ 0.43
Nphp4P59240 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC17.71■□□□□ 0.43
Nphp4P59240 Gm45925-201ENSMUST00000218882 744 ntBASIC17.71■□□□□ 0.43
Nphp4P59240 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Nphp4P59240 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nphp4P59240 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nphp4P59240 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Nphp4P59240 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Nphp4P59240 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Nphp4P59240 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Nphp4P59240 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Nphp4P59240 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Nphp4P59240 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nphp4P59240 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.7■□□□□ 0.42
Nphp4P59240 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nphp4P59240 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Nphp4P59240 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.7■□□□□ 0.42
Nphp4P59240 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Nphp4P59240 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.7■□□□□ 0.42
Nphp4P59240 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Nphp4P59240 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nphp4P59240 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Nphp4P59240 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Gm12715-201ENSMUST00000121430 1128 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Nphp4P59240 Gm2383-201ENSMUST00000181461 807 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Gm37201-201ENSMUST00000191845 523 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Gm44405-201ENSMUST00000198952 126 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Gm39404-201ENSMUST00000216350 313 ntBASIC17.69■□□□□ 0.42
Nphp4P59240 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nphp4P59240 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nphp4P59240 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Nphp4P59240 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nphp4P59240 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.68■□□□□ 0.42
Nphp4P59240 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nphp4P59240 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms