Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm13736-201ENSMUST00000119272 253 ntBASIC13.83□□□□□ -0.2
NcanP55066 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.83□□□□□ -0.2
NcanP55066 Gm24845-201ENSMUST00000158034 109 ntBASIC13.83□□□□□ -0.2
NcanP55066 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 Gm25072-201ENSMUST00000175233 235 ntBASIC13.83□□□□□ -0.2
NcanP55066 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.83□□□□□ -0.2
NcanP55066 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.83□□□□□ -0.2
NcanP55066 Gm5369-201ENSMUST00000217499 588 ntBASIC13.83□□□□□ -0.2
NcanP55066 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.83□□□□□ -0.2
NcanP55066 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
NcanP55066 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
NcanP55066 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.83□□□□□ -0.2
NcanP55066 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.82□□□□□ -0.2
NcanP55066 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.82□□□□□ -0.2
NcanP55066 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Gm11801-201ENSMUST00000117807 746 ntBASIC13.82□□□□□ -0.2
NcanP55066 Gm7541-201ENSMUST00000118361 535 ntBASIC13.82□□□□□ -0.2
NcanP55066 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Gm6963-201ENSMUST00000147879 379 ntBASIC13.82□□□□□ -0.2
NcanP55066 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.82□□□□□ -0.2
NcanP55066 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.82□□□□□ -0.2
NcanP55066 Gm37201-201ENSMUST00000191845 523 ntBASIC13.82□□□□□ -0.2
NcanP55066 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Gm45550-201ENSMUST00000209380 946 ntBASIC13.82□□□□□ -0.2
NcanP55066 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NcanP55066 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
NcanP55066 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
NcanP55066 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
NcanP55066 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.82□□□□□ -0.2
NcanP55066 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NcanP55066 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.81□□□□□ -0.2
NcanP55066 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Gm6630-201ENSMUST00000119199 454 ntBASIC13.81□□□□□ -0.2
NcanP55066 Gm6039-201ENSMUST00000121667 1250 ntBASIC13.81□□□□□ -0.2
NcanP55066 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.81□□□□□ -0.2
NcanP55066 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.81□□□□□ -0.2
NcanP55066 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.81□□□□□ -0.2
NcanP55066 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.81□□□□□ -0.2
NcanP55066 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NcanP55066 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms