Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.7□□□□□ -0.38
Sox3P53784 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.7□□□□□ -0.38
Sox3P53784 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Gm38671-201ENSMUST00000200573 130 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.7□□□□□ -0.38
Sox3P53784 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.7□□□□□ -0.38
Sox3P53784 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sox3P53784 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.7□□□□□ -0.38
Sox3P53784 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Sox3P53784 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sox3P53784 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Sox3P53784 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.69□□□□□ -0.38
Sox3P53784 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox3P53784 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.69□□□□□ -0.38
Sox3P53784 Gm22331-201ENSMUST00000158066 136 ntBASIC12.69□□□□□ -0.38
Sox3P53784 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Sox3P53784 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox3P53784 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.69□□□□□ -0.38
Sox3P53784 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm18905-201ENSMUST00000205454 928 ntBASIC12.69□□□□□ -0.38
Sox3P53784 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox3P53784 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.69□□□□□ -0.38
Sox3P53784 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox3P53784 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.69□□□□□ -0.38
Sox3P53784 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sox3P53784 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Sox3P53784 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sox3P53784 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox3P53784 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sox3P53784 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.68□□□□□ -0.38
Sox3P53784 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Gm22018-201ENSMUST00000104357 131 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox3P53784 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox3P53784 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Gm10275-202ENSMUST00000168697 495 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox3P53784 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.68□□□□□ -0.38
Sox3P53784 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.68□□□□□ -0.38
Sox3P53784 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Sox3P53784 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Gm18041-201ENSMUST00000218210 618 ntBASIC12.68□□□□□ -0.38
Sox3P53784 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.68□□□□□ -0.38
Sox3P53784 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms