Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Lhx3P50481 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lhx3P50481 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lhx3P50481 Gm12384-201ENSMUST00000119228 919 ntBASIC13.38□□□□□ -0.27
Lhx3P50481 Gm11637-201ENSMUST00000120601 592 ntBASIC13.38□□□□□ -0.27
Lhx3P50481 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.38□□□□□ -0.27
Lhx3P50481 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.38□□□□□ -0.27
Lhx3P50481 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Gm43438-201ENSMUST00000198133 379 ntBASIC13.38□□□□□ -0.27
Lhx3P50481 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.38□□□□□ -0.27
Lhx3P50481 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Lhx3P50481 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Lhx3P50481 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.38□□□□□ -0.27
Lhx3P50481 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Lhx3P50481 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Lhx3P50481 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Lhx3P50481 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Lhx3P50481 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Lhx3P50481 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Mir686-201ENSMUST00000102174 109 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.37□□□□□ -0.27
Lhx3P50481 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.37□□□□□ -0.27
Lhx3P50481 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lhx3P50481 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx3P50481 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.37□□□□□ -0.27
Lhx3P50481 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.37□□□□□ -0.27
Lhx3P50481 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm10268-201ENSMUST00000085340 555 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lhx3P50481 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Lhx3P50481 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Lhx3P50481 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC13.37□□□□□ -0.27
Lhx3P50481 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.37□□□□□ -0.27
Lhx3P50481 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.36□□□□□ -0.27
Lhx3P50481 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.36□□□□□ -0.27
Lhx3P50481 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Lhx3P50481 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Lhx3P50481 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.36□□□□□ -0.27
Lhx3P50481 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.36□□□□□ -0.27
Lhx3P50481 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Lhx3P50481 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Lhx3P50481 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms