Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Shmt1P50431 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Gm8062-201ENSMUST00000139696 444 ntBASIC13.97□□□□□ -0.17
Shmt1P50431 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Gm7029-201ENSMUST00000173226 450 ntBASIC13.97□□□□□ -0.17
Shmt1P50431 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.97□□□□□ -0.17
Shmt1P50431 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Shmt1P50431 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.97□□□□□ -0.17
Shmt1P50431 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.97□□□□□ -0.17
Shmt1P50431 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.97□□□□□ -0.17
Shmt1P50431 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Shmt1P50431 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Shmt1P50431 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Shmt1P50431 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Shmt1P50431 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Gm13392-201ENSMUST00000117708 150 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Snora78-201ENSMUST00000158630 128 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
Shmt1P50431 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Gm27682-201ENSMUST00000183930 110 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Mir7221-201ENSMUST00000184009 72 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Gm37424-201ENSMUST00000191727 561 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Gm43818-201ENSMUST00000200605 466 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.96□□□□□ -0.17
Shmt1P50431 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.96□□□□□ -0.17
Shmt1P50431 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.96□□□□□ -0.17
Shmt1P50431 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Shmt1P50431 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.96□□□□□ -0.18
Shmt1P50431 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Shmt1P50431 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt1P50431 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shmt1P50431 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Shmt1P50431 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Shmt1P50431 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt1P50431 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Shmt1P50431 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt1P50431 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt1P50431 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Shmt1P50431 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Shmt1P50431 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Shmt1P50431 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Shmt1P50431 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Shmt1P50431 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.95□□□□□ -0.18
Shmt1P50431 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.95□□□□□ -0.18
Shmt1P50431 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.95□□□□□ -0.18
Shmt1P50431 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Shmt1P50431 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms