Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ptx3P48759 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ptx3P48759 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Ptx3P48759 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.32□□□□□ -0.44
Ptx3P48759 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.32□□□□□ -0.44
Ptx3P48759 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ptx3P48759 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ptx3P48759 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Gm12203-201ENSMUST00000118235 598 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Gm12209-201ENSMUST00000120089 596 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.31□□□□□ -0.44
Ptx3P48759 Mir1938-201ENSMUST00000158746 100 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Gm43630-201ENSMUST00000201550 776 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ptx3P48759 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Ptx3P48759 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.31□□□□□ -0.44
Ptx3P48759 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.31□□□□□ -0.44
Ptx3P48759 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.31□□□□□ -0.44
Ptx3P48759 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ptx3P48759 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.3□□□□□ -0.44
Ptx3P48759 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.3□□□□□ -0.44
Ptx3P48759 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Ptx3P48759 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Gm16177-201ENSMUST00000120728 718 ntBASIC12.3□□□□□ -0.44
Ptx3P48759 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.3□□□□□ -0.44
Ptx3P48759 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.3□□□□□ -0.44
Ptx3P48759 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.3□□□□□ -0.44
Ptx3P48759 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ptx3P48759 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Ptx3P48759 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms