Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Rfx2P48379 Gm5687-201ENSMUST00000118252 640 ntBASIC13.87□□□□□ -0.19
Rfx2P48379 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Rfx2P48379 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.87□□□□□ -0.19
Rfx2P48379 Gm22331-201ENSMUST00000158066 136 ntBASIC13.87□□□□□ -0.19
Rfx2P48379 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.87□□□□□ -0.19
Rfx2P48379 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Rfx2P48379 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.87□□□□□ -0.19
Rfx2P48379 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.87□□□□□ -0.19
Rfx2P48379 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Rfx2P48379 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Rfx2P48379 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rfx2P48379 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Rfx2P48379 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.85□□□□□ -0.19
Rfx2P48379 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Gm17420-201ENSMUST00000164753 153 ntBASIC13.85□□□□□ -0.19
Rfx2P48379 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.85□□□□□ -0.19
Rfx2P48379 Gm40466-201ENSMUST00000212174 422 ntBASIC13.85□□□□□ -0.19
Rfx2P48379 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.85□□□□□ -0.19
Rfx2P48379 Gm26315-201ENSMUST00000083890 321 ntBASIC13.85□□□□□ -0.19
Rfx2P48379 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx2P48379 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rfx2P48379 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Rfx2P48379 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Rfx2P48379 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rfx2P48379 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rfx2P48379 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rfx2P48379 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 103.5 ms