Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Vps4bP46467 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Vps4bP46467 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Vps4bP46467 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.45□□□□□ -0.26
Vps4bP46467 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Vps4bP46467 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.44□□□□□ -0.26
Vps4bP46467 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Gm16215-201ENSMUST00000161990 637 ntBASIC13.44□□□□□ -0.26
Vps4bP46467 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Vps4bP46467 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Gm43094-201ENSMUST00000196549 921 ntBASIC13.44□□□□□ -0.26
Vps4bP46467 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.44□□□□□ -0.26
Vps4bP46467 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Vps4bP46467 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Vps4bP46467 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.44□□□□□ -0.26
Vps4bP46467 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.44□□□□□ -0.26
Vps4bP46467 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Vps4bP46467 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Vps4bP46467 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Gm11524-201ENSMUST00000119349 807 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.43□□□□□ -0.26
Vps4bP46467 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.43□□□□□ -0.26
Vps4bP46467 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Vps4bP46467 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Gm28631-201ENSMUST00000190740 334 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Gm9797-201ENSMUST00000052902 613 ntBASIC13.43□□□□□ -0.26
Vps4bP46467 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Vps4bP46467 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Vps4bP46467 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Vps4bP46467 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.42□□□□□ -0.26
Vps4bP46467 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps4bP46467 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Vps4bP46467 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.42□□□□□ -0.26
Vps4bP46467 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Vps4bP46467 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Vps4bP46467 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms