Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cdx2P43241 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.52□□□□□ -0.41
Cdx2P43241 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Gm11531-201ENSMUST00000117614 555 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdx2P43241 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.51□□□□□ -0.41
Cdx2P43241 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdx2P43241 Gm27341-201ENSMUST00000183570 106 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm13097-201ENSMUST00000210722 397 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm18212-201ENSMUST00000211678 889 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.51□□□□□ -0.41
Cdx2P43241 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.51□□□□□ -0.41
Cdx2P43241 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cdx2P43241 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cdx2P43241 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cdx2P43241 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm12176-201ENSMUST00000121420 875 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm22121-201ENSMUST00000175148 54 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm2546-201ENSMUST00000182630 991 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm38317-201ENSMUST00000195564 343 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm5904-201ENSMUST00000210286 865 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm5950-201ENSMUST00000213337 772 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdx2P43241 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdx2P43241 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdx2P43241 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Cdx2P43241 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.5□□□□□ -0.41
Cdx2P43241 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdx2P43241 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdx2P43241 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms