Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HttP42859 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.68□□□□□ -0.22
HttP42859 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.68□□□□□ -0.22
HttP42859 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HttP42859 Gm37458-201ENSMUST00000194055 410 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm43752-201ENSMUST00000198475 697 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm5340-201ENSMUST00000203733 880 ntBASIC13.68□□□□□ -0.22
HttP42859 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.68□□□□□ -0.22
HttP42859 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.68□□□□□ -0.22
HttP42859 Gm17831-201ENSMUST00000205579 900 ntBASIC13.68□□□□□ -0.22
HttP42859 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HttP42859 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HttP42859 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
HttP42859 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Gm13549-201ENSMUST00000118339 796 ntBASIC13.67□□□□□ -0.22
HttP42859 CT030135.2-201ENSMUST00000225255 893 ntBASIC13.67□□□□□ -0.22
HttP42859 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Gm18201-201ENSMUST00000174735 875 ntBASIC13.67□□□□□ -0.22
HttP42859 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.67□□□□□ -0.22
HttP42859 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HttP42859 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.66□□□□□ -0.22
HttP42859 Gm6630-201ENSMUST00000119199 454 ntBASIC13.66□□□□□ -0.22
HttP42859 Gm11246-201ENSMUST00000120880 345 ntBASIC13.66□□□□□ -0.22
HttP42859 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HttP42859 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC13.66□□□□□ -0.22
HttP42859 Gm40879-201ENSMUST00000220759 612 ntBASIC13.66□□□□□ -0.22
HttP42859 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.66□□□□□ -0.22
HttP42859 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.66□□□□□ -0.22
HttP42859 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.66□□□□□ -0.22
HttP42859 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.66□□□□□ -0.22
HttP42859 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HttP42859 Gm16296-201ENSMUST00000159905 325 ntBASIC13.66□□□□□ -0.22
HttP42859 Gm6485-201ENSMUST00000160676 439 ntBASIC13.66□□□□□ -0.22
HttP42859 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.66□□□□□ -0.22
HttP42859 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.66□□□□□ -0.22
HttP42859 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.66□□□□□ -0.22
HttP42859 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HttP42859 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.65□□□□□ -0.22
HttP42859 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.65□□□□□ -0.22
HttP42859 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HttP42859 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.65□□□□□ -0.22
HttP42859 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Gm22877-201ENSMUST00000175451 105 ntBASIC13.65□□□□□ -0.22
HttP42859 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HttP42859 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.65□□□□□ -0.22
HttP42859 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HttP42859 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms