Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Chd1P40201 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Chd1P40201 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC19.37■□□□□ 0.69
Chd1P40201 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
Chd1P40201 Gm8343-201ENSMUST00000182705 994 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC19.37■□□□□ 0.69
Chd1P40201 Gm19640-201ENSMUST00000214849 464 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Chd1P40201 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Gm9361-201ENSMUST00000198695 1507 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Gm43134-201ENSMUST00000199434 1886 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm13142-201ENSMUST00000117213 1453 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Gm11422-201ENSMUST00000118925 1103 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm12516-201ENSMUST00000120819 385 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm11980-201ENSMUST00000121445 986 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm8737-201ENSMUST00000122208 642 ntBASIC19.37■□□□□ 0.69
Chd1P40201 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC19.37■□□□□ 0.69
Chd1P40201 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC19.37■□□□□ 0.69
Chd1P40201 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC19.37■□□□□ 0.69
Chd1P40201 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
Chd1P40201 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Chd1P40201 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Chd1P40201 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd1P40201 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Chd1P40201 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Chd1P40201 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd1P40201 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Gm21092-201ENSMUST00000178995 955 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Gm5100-201ENSMUST00000195631 589 ntBASIC19.36■□□□□ 0.69
Chd1P40201 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Gm19009-201ENSMUST00000223072 823 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Gm26448-201ENSMUST00000082446 203 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC19.36■□□□□ 0.69
Chd1P40201 Gm7278-201ENSMUST00000119836 1401 ntBASIC19.36■□□□□ 0.69
Chd1P40201 AC171277.1-201ENSMUST00000216902 1441 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Chd1P40201 Gm9025-201ENSMUST00000122415 1575 ntBASIC19.36■□□□□ 0.69
Chd1P40201 AC113060.1-201ENSMUST00000225689 1573 ntBASIC19.36■□□□□ 0.69
Chd1P40201 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Gm1848-201ENSMUST00000120711 789 ntBASIC19.35■□□□□ 0.69
Chd1P40201 Gm13182-201ENSMUST00000122241 312 ntBASIC19.35■□□□□ 0.69
Chd1P40201 n-R5s84-201ENSMUST00000122591 109 ntBASIC19.35■□□□□ 0.69
Chd1P40201 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC19.35■□□□□ 0.69
Chd1P40201 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC19.35■□□□□ 0.69
Chd1P40201 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Gm4862-201ENSMUST00000170405 438 ntBASIC19.35■□□□□ 0.69
Chd1P40201 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC19.35■□□□□ 0.69
Chd1P40201 Gm37299-201ENSMUST00000193951 826 ntBASIC19.35■□□□□ 0.69
Chd1P40201 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Chd1P40201 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC19.35■□□□□ 0.69
Chd1P40201 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Chd1P40201 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 AC154725.1-201ENSMUST00000224826 1961 ntBASIC19.34■□□□□ 0.69
Chd1P40201 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 n-R5s64-201ENSMUST00000102019 119 ntBASIC19.34■□□□□ 0.69
Chd1P40201 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Chd1P40201 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC19.34■□□□□ 0.69
Chd1P40201 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Chd1P40201 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms