Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Timp3P39876 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Timp3P39876 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.87□□□□□ -0.67
Timp3P39876 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Timp3P39876 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.86□□□□□ -0.67
Timp3P39876 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm13689-201ENSMUST00000119360 685 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Gm11425-201ENSMUST00000119608 498 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Mir1982-201ENSMUST00000157368 74 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Gm27847-201ENSMUST00000183711 107 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Gm27375-201ENSMUST00000183799 107 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.86□□□□□ -0.67
Timp3P39876 Gm38671-201ENSMUST00000200573 130 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm9899-201ENSMUST00000065519 555 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Gm9396-201ENSMUST00000076703 567 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.86□□□□□ -0.67
Timp3P39876 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Timp3P39876 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Timp3P39876 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Timp3P39876 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Timp3P39876 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Timp3P39876 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Gm13612-201ENSMUST00000119276 390 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Gm8835-201ENSMUST00000173096 1169 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Gm2445-201ENSMUST00000182798 989 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Gm45841-201ENSMUST00000207700 164 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.85□□□□□ -0.67
Timp3P39876 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms