Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Fen1P39749 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.31□□□□□ -0.28
Fen1P39749 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Fen1P39749 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.31□□□□□ -0.28
Fen1P39749 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Gm15460-201ENSMUST00000118147 391 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Mir1897-201ENSMUST00000122581 272 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.31□□□□□ -0.28
Fen1P39749 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.31□□□□□ -0.28
Fen1P39749 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.31□□□□□ -0.28
Fen1P39749 Gm21470-201ENSMUST00000187680 696 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Gm43474-201ENSMUST00000196415 774 ntBASIC13.31□□□□□ -0.28
Fen1P39749 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Fen1P39749 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.31□□□□□ -0.28
Fen1P39749 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.31□□□□□ -0.28
Fen1P39749 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Fen1P39749 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Fen1P39749 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Gm25287-201ENSMUST00000103846 110 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Gm22918-201ENSMUST00000103855 110 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Gm24543-201ENSMUST00000103867 82 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Fen1P39749 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.3□□□□□ -0.28
Fen1P39749 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.3□□□□□ -0.28
Fen1P39749 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Fen1P39749 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.3□□□□□ -0.28
Fen1P39749 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Fen1P39749 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.29□□□□□ -0.28
Fen1P39749 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fen1P39749 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.28
Fen1P39749 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Fen1P39749 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.29□□□□□ -0.28
Fen1P39749 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.29□□□□□ -0.28
Fen1P39749 Gm25948-201ENSMUST00000175334 112 ntBASIC13.29□□□□□ -0.28
Fen1P39749 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.29□□□□□ -0.28
Fen1P39749 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Fen1P39749 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.29□□□□□ -0.28
Fen1P39749 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms