Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.23□□□□□ -0.45
Foxa1P35582 Mir1894-201ENSMUST00000122802 81 ntBASIC12.23□□□□□ -0.45
Foxa1P35582 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.23□□□□□ -0.45
Foxa1P35582 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.23□□□□□ -0.45
Foxa1P35582 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Foxa1P35582 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Foxa1P35582 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.23□□□□□ -0.45
Foxa1P35582 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Foxa1P35582 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Foxa1P35582 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.22□□□□□ -0.45
Foxa1P35582 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.22□□□□□ -0.45
Foxa1P35582 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.22□□□□□ -0.45
Foxa1P35582 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.22□□□□□ -0.45
Foxa1P35582 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Foxa1P35582 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Foxa1P35582 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Foxa1P35582 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Foxa1P35582 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Foxa1P35582 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.21□□□□□ -0.45
Foxa1P35582 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Foxa1P35582 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Foxa1P35582 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Foxa1P35582 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.21□□□□□ -0.45
Foxa1P35582 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.21□□□□□ -0.45
Foxa1P35582 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.21□□□□□ -0.45
Foxa1P35582 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 Gm17794-201ENSMUST00000220252 955 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 Gm8598-201ENSMUST00000221184 836 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.21□□□□□ -0.45
Foxa1P35582 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.21□□□□□ -0.45
Foxa1P35582 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Foxa1P35582 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms