Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm15376-201ENSMUST00000122258 783 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Mir7684-201ENSMUST00000183858 60 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.28□□□□□ -0.44
Hoxc5P32043 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Pck2-205ENSMUST00000226352 2784 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.28□□□□□ -0.44
Hoxc5P32043 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Hoxc5P32043 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Hoxc5P32043 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.27□□□□□ -0.44
Hoxc5P32043 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
Hoxc5P32043 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Hoxc5P32043 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Hoxc5P32043 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm12485-201ENSMUST00000119641 291 ntBASIC12.27□□□□□ -0.45
Hoxc5P32043 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm15321-201ENSMUST00000121290 288 ntBASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxc5P32043 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.27□□□□□ -0.45
Hoxc5P32043 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm17330-201ENSMUST00000221047 165 ntBASIC12.27□□□□□ -0.45
Hoxc5P32043 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Hoxc5P32043 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxc5P32043 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxc5P32043 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc5P32043 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxc5P32043 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Hoxc5P32043 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxc5P32043 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.26□□□□□ -0.45
Hoxc5P32043 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc5P32043 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Hoxc5P32043 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc5P32043 Gm28760-201ENSMUST00000185995 736 ntBASIC12.26□□□□□ -0.45
Hoxc5P32043 Gm5279-201ENSMUST00000199575 745 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms