Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Gm16379-201ENSMUST00000161469 348 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.17□□□□□ -0.3
Nckap1P28660 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Gm8762-201ENSMUST00000193486 339 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 Gm38266-201ENSMUST00000194931 421 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.17□□□□□ -0.3
Nckap1P28660 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nckap1P28660 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nckap1P28660 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Gm26185-201ENSMUST00000157692 266 ntBASIC13.16□□□□□ -0.3
Nckap1P28660 Gm25927-201ENSMUST00000175058 117 ntBASIC13.16□□□□□ -0.3
Nckap1P28660 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Gm9823-201ENSMUST00000051212 327 ntBASIC13.16□□□□□ -0.3
Nckap1P28660 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Nckap1P28660 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.16□□□□□ -0.3
Nckap1P28660 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Nckap1P28660 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.16□□□□□ -0.3
Nckap1P28660 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Nckap1P28660 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Nckap1P28660 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Nckap1P28660 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.15□□□□□ -0.3
Nckap1P28660 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.15□□□□□ -0.3
Nckap1P28660 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.15□□□□□ -0.3
Nckap1P28660 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.15□□□□□ -0.3
Nckap1P28660 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Nckap1P28660 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.15□□□□□ -0.3
Nckap1P28660 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.15□□□□□ -0.3
Nckap1P28660 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nckap1P28660 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Nckap1P28660 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nckap1P28660 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms