Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.32■□□□□ 0.04
Pde6aP27664 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Pde6aP27664 Gm13369-201ENSMUST00000119442 987 ntBASIC15.32■□□□□ 0.04
Pde6aP27664 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.32■□□□□ 0.04
Pde6aP27664 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.32■□□□□ 0.04
Pde6aP27664 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Pde6aP27664 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.32■□□□□ 0.04
Pde6aP27664 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pde6aP27664 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Pde6aP27664 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm28693-202ENSMUST00000190758 331 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm37748-201ENSMUST00000194379 1140 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Gm37497-201ENSMUST00000195830 798 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.31■□□□□ 0.04
Pde6aP27664 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Gm18041-201ENSMUST00000218210 618 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pde6aP27664 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.31■□□□□ 0.04
Pde6aP27664 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Pde6aP27664 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Pde6aP27664 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pde6aP27664 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pde6aP27664 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.31■□□□□ 0.04
Pde6aP27664 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pde6aP27664 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.3■□□□□ 0.04
Pde6aP27664 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.3■□□□□ 0.04
Pde6aP27664 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.3■□□□□ 0.04
Pde6aP27664 Gm8805-201ENSMUST00000117848 313 ntBASIC15.3■□□□□ 0.04
Pde6aP27664 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.3■□□□□ 0.04
Pde6aP27664 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.3■□□□□ 0.04
Pde6aP27664 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pde6aP27664 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Gm29127-201ENSMUST00000188304 517 ntBASIC15.3■□□□□ 0.04
Pde6aP27664 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.3■□□□□ 0.04
Pde6aP27664 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Gm29705-201ENSMUST00000212598 474 ntBASIC15.3■□□□□ 0.04
Pde6aP27664 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.3■□□□□ 0.04
Pde6aP27664 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pde6aP27664 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms