Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.04□□□□□ -0.64
Col8a2P25318 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Col8a2P25318 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Gm11618-201ENSMUST00000117946 267 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Gm6222-202ENSMUST00000182143 629 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Gm37497-201ENSMUST00000195830 798 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Gm43818-201ENSMUST00000200605 466 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.03□□□□□ -0.64
Col8a2P25318 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Col8a2P25318 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Col8a2P25318 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.02□□□□□ -0.64
Col8a2P25318 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Col8a2P25318 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Mir686-201ENSMUST00000102174 109 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Gm22018-201ENSMUST00000104357 131 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Gm5187-201ENSMUST00000117317 991 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.02□□□□□ -0.65
Col8a2P25318 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.02□□□□□ -0.65
Col8a2P25318 Gm4271-201ENSMUST00000174444 973 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Gm27572-201ENSMUST00000183702 255 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.02□□□□□ -0.65
Col8a2P25318 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.02□□□□□ -0.65
Col8a2P25318 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.02□□□□□ -0.65
Col8a2P25318 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Col8a2P25318 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.01□□□□□ -0.65
Col8a2P25318 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Col8a2P25318 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Col8a2P25318 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms